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Bi-allelic variants in WDR47 cause a complex neurodevelopmental syndrome

ORCID
0000-0001-9776-5234
Affiliation
Institut de Génétique et de Biologie Moléculaire et Cellulaire IGBMC F-67404 Illkirch France
Bayam, Efil;
Affiliation
Institut de Génétique et de Biologie Moléculaire et Cellulaire IGBMC F-67404 Illkirch France
Tilly, Peggy;
ORCID
0000-0002-1533-3380
Affiliation
Institut de Génétique et de Biologie Moléculaire et Cellulaire IGBMC F-67404 Illkirch France
Collins, Stephan C;
Affiliation
Institut de Génétique et de Biologie Moléculaire et Cellulaire IGBMC F-67404 Illkirch France
Rivera Alvarez, José;
Affiliation
Institut de Génétique et de Biologie Moléculaire et Cellulaire IGBMC F-67404 Illkirch France
Kannan, Meghna;
ORCID
0009-0006-4230-2260
Affiliation
Université de Bourgogne INSERM UMR1231 21000 Dijon France
Tonneau, Lucile;
Affiliation
Institut de Génétique et de Biologie Moléculaire et Cellulaire IGBMC F-67404 Illkirch France
Brivio, Elena;
Affiliation
Université de Strasbourg, CNRS GMGM UMR7156 F-67000 Strasbourg France
Rinaldi, Bruno;
ORCID
0009-0006-2825-0716
Affiliation
Institut de Génétique et de Biologie Moléculaire et Cellulaire IGBMC F-67404 Illkirch France
Lecat, Romain;
Affiliation
Institut de Génétique et de Biologie Moléculaire et Cellulaire IGBMC F-67404 Illkirch France
Schwaller, Noémie;
ORCID
0000-0003-1124-576X
Affiliation
Université de Lille, INSERM, CHU Lille, Laboratory of Development and Plasticity of the Neuroendocrine Brain Lille Neuroscience & Cognition UMR-S 1172 Lille France
Cotellessa, Ludovica;
ORCID
0000-0003-2999-2229
Affiliation
Department of Translational Genomics, Center for Genomic Medicine King Faisal Specialist Hospital and Research Center Riyadh Saudi Arabia
Maddirevula, Sateesh;
Affiliation
Mendelics Análise Genomica SA CEP 02511-000 Sao Paulo Brazil
Monteiro, Fabiola;
Affiliation
Placental Cell Biology Group, National Institute of Environmental Health Sciences National Institutes of Health 27709 Research Triangle Park NC USA
Guardia, Carlos M;
ORCID
0009-0009-1711-8949
Affiliation
Mendelics Análise Genomica SA CEP 02511-000 Sao Paulo Brazil
Kitajima, João Paulo;
Affiliation
Mendelics Análise Genomica SA CEP 02511-000 Sao Paulo Brazil
Kok, Fernando;
Affiliation
Department of Pediatrics Showa University School of Medicine 142-8555 Tokyo Japan
Kato, Mitsuhiro;
Affiliation
Department of Pediatric and Child Health Faculty of Medicine University of Khartoum Khartoum Sudan
Hamed, Ahlam A A;
ORCID
0000-0002-4379-2111
Affiliation
Health Sector King Abdulaziz City for Science and Technology 11442 Riyadh Saudi Arabia
Salih, Mustafa A;
Affiliation
Department of Pediatrics, Genetic Unit Armed Forces Hospital Khamis Mushayt Saudi Arabia
Al Tala, Saeed;
Affiliation
Department of Translational Genomics, Center for Genomic Medicine King Faisal Specialist Hospital and Research Center Riyadh Saudi Arabia
Hashem, Mais O;
Affiliation
Department of Brain and Neurosciences Tokyo Metropolitan Institute of Medical Science 156-0057 Tokyo Japan
Tada, Hiroko;
Affiliation
Department of Biochemistry Hamamatsu University School of Medicine 1-20-1 Handayama, Chuuo-ku 431-3192 Hamamatsu Japan
Saitsu, Hirotomo;
ORCID
0000-0001-5850-2415
Affiliation
Center of Genetics and Prenatal Diagnosis “Zygote” 84131 Salerno Italy
Stabile, Mariano;
ORCID
0000-0002-3075-1441
Affiliation
Université de Lille, INSERM, CHU Lille, Laboratory of Development and Plasticity of the Neuroendocrine Brain Lille Neuroscience & Cognition UMR-S 1172 Lille France
Giacobini, Paolo;
ORCID
0000-0002-5412-6288
Affiliation
Université de Strasbourg, CNRS GMGM UMR7156 F-67000 Strasbourg France
Friant, Sylvie;
Affiliation
Human Genetics Bioscientia GmbH Ingelheim Germany
Yüksel, Zafer;
Affiliation
Department of Biochemistry Hamamatsu University School of Medicine 1-20-1 Handayama, Chuuo-ku 431-3192 Hamamatsu Japan
Nakashima, Mitsuko;
Affiliation
Department of Translational Genomics, Center for Genomic Medicine King Faisal Specialist Hospital and Research Center Riyadh Saudi Arabia
Alkuraya, Fowzan S;
ORCID
0000-0002-1924-6807
Affiliation
Institut de Génétique et de Biologie Moléculaire et Cellulaire IGBMC F-67404 Illkirch France
Yalcin, Binnaz;
ORCID
0000-0001-6559-1065
Affiliation
Institut de Génétique et de Biologie Moléculaire et Cellulaire IGBMC F-67404 Illkirch France
Godin, Juliette D

Abstract Brain development requires the coordinated growth of structures and cues that are essential for forming neural circuits and cognitive functions. The corpus callosum, the largest interhemispheric connection, is formed by the axons of callosal projection neurons through a series of tightly regulated cellular events, including neuronal specification, migration, axon extension and branching. Defects in any of those steps can lead to a range of disorders known as syndromic corpus callosum dysgenesis (CCD). We report five unrelated families carrying bi-allelic variants in WDR47 presenting with CCD together with other neuroanatomical phenotypes such as microcephaly and enlarged ventricles. Using in vitro and in vivo mouse models and complementation assays, we show that WDR47 is required for survival of callosal neurons by contributing to the maintenance of mitochondrial and microtubule homeostasis. We further propose that severity of the CCD phenotype is determined by the degree of the loss of function caused by the human variants. Taken together, we identify WDR47 as a causative gene of a new neurodevelopmental syndrome characterized by corpus callosum abnormalities and other neuroanatomical malformations.

Synopsis This study provides the first evidence of a causal relationship between bi-allelic variants in the WDR47 gene and a complex neurodevelopmental syndrome characterized by corpus callosum dysgenesis (CCD), microcephaly and other neuroanatomical phenotypes in both humans and mice. Early onset neuronal degeneration is the key factor driving the corpus callosum agenesis upon complete Wdr47 loss. Alterations in mitochondrial homeostasis, microtubule dynamics, and axonal transport collectively contribute to the poor survival of Wdr47 -deficient callosal projection neurons. The severity and breadth of neuroanatomical phenotypes correlate with the degree of functional loss due to the human variants. WDR47 variants should be considered in unexplained cases of corpus callosum dysgenesis and microcephaly, intellectual disability and epilepsy.

This study provides the first evidence of a causal relationship between bi-allelic variants in the WDR47 gene and a complex neurodevelopmental syndrome characterized by corpus callosum dysgenesis (CCD), microcephaly and other neuroanatomical phenotypes in both humans and mice.

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License Holder: © The Author(s) 2024

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