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Construction of a ferroptosis scoring system and identification of LINC01572 as a novel ferroptosis suppressor in lung adenocarcinoma

Affiliation
Nantong Hospital of Traditional Chinese Medicine ,Affiliated Traditional Chinese Medicine Hospital of Nantong University ,Nantong ,China
Hong, Lingling;
Affiliation
Department of Occupational Medicine and Environmental Toxicology ,Nantong Key Laboratory of Environmental Toxicology ,School of Public Health ,Nantong University ,Nantong ,China
Wang, Xuehai;
Affiliation
Department of Thoracic and Cardiac Surgery ,Nanjing Brain Hospital ,Nanjing ,China
Cui, Weiming;
Affiliation
Department of Occupational Medicine and Environmental Toxicology ,Nantong Key Laboratory of Environmental Toxicology ,School of Public Health ,Nantong University ,Nantong ,China
Wang, Fengxu;
Affiliation
Nantong Hospital of Traditional Chinese Medicine ,Affiliated Traditional Chinese Medicine Hospital of Nantong University ,Nantong ,China
Shi, Weiwei;
Affiliation
Department of Occupational Medicine and Environmental Toxicology ,Nantong Key Laboratory of Environmental Toxicology ,School of Public Health ,Nantong University ,Nantong ,China
Yu, Shali;
Affiliation
Nantong Fourth People’s Hospital ,Nantong ,China
Luo, Yonghua;
Affiliation
Jiangsu Provincial Center for Disease Control and Prevention ,Nanjing ,China
Zhong, Lixin;
Affiliation
Department of Occupational Medicine and Environmental Toxicology ,Nantong Key Laboratory of Environmental Toxicology ,School of Public Health ,Nantong University ,Nantong ,China
Zhao, Xinyuan

Background: Ferroptosis is a novel process of programmed cell death driven by excessive lipid peroxidation that is associated with the development of lung adenocarcinoma. N6-methyladenosine (m6a) modification of multiple genes is involved in regulating the ferroptosis process, while the predictive value of N6-methyladenosine- and ferroptosis-associated lncRNA (FMRlncRNA) in the prognosis of patients remains with LUAD remains unknown. Methods: Unsupervised cluster algorithm was applied to generate subcluster in LUAD according to ferroptosis-associated lncRNA. Stepwise Cox analysis and LASSO algorithm were applied to develop a prognostic model. Cellular location was detected by single-cell analysis. Also, we conducted Gene set enrichment analysis (GSEA) enrichment, immune microenvironment and drug sensitivity analysis. In addition, the expression and function of the LINC01572 were investigated by several in vitro experiments including qRT-PCR, cell viability assays and ferroptosis assays. Results: A novel ferroptosis-associated lncRNAs-based molecular subtype containing two subclusters were determined in LUAD. Then, we successfully created a risk model according to five ferroptosis-associated lncRNAs (LINC00472, MBNL1-AS1, LINC01572, ZFPM2-AS1, and TMPO-AS1). Our nominated model had good stability and predictive function. The expression patterns of five ferroptosis-associated lncRNAs were confirmed by polymerase chain reaction (PCR) in LUAD cell lines. Knockdown of LINC01572 significantly inhibited cell viability and induced ferroptosis in LUAD cell lines. Conclusion: Our data provided a risk score system based on ferroptosis-associated lncRNAs with prognostic value in LUAD. Moreover, LINC01572 may serve as a novel ferroptosis suppressor in LUAD.

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License Holder: Copyright © 2023 Hong, Wang, Cui, Wang, Shi, Yu, Luo, Zhong and Zhao.

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